Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Acinetobacter radioresistens SK82

 Score =  332 bits (850), Expect = 5e-96
 Identities = 163/236 (69%), Positives = 199/236 (84%)

Query: 4   LKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTITID 63
           L  +HLAK+Y KR VV DVS  ++SGQIVGLLGPNGAGKTTSFYM+VGLV  D+G I +D
Sbjct: 11  LTIKHLAKNYNKRWVVKDVSFSMQSGQIVGLLGPNGAGKTTSFYMVVGLVRMDKGEIHLD 70

Query: 64  DNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLEDLLE 123
             D+S L MH R+R GIGYLPQEASIFRKL++ +NIMA+L+TR +L  ++RQ +L +LL 
Sbjct: 71  HLDLSDLAMHERARKGIGYLPQEASIFRKLTIAENIMAILETRRDLNKQQRQQRLNELLN 130

Query: 124 EFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKIIEHL 183
           +F I HI+ S GM++SGGERRR EIARALAA+P+F+LLDEPFAGVDPISV DIK II +L
Sbjct: 131 DFKITHIKDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISVGDIKDIIRNL 190

Query: 184 RDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDVLNNEQVKQVYLGEQF 239
           ++RG+GVLITDHNVRETL +CEKAYIVS+G +IAEGTPQ++L NE V+QVYLGE F
Sbjct: 191 KERGIGVLITDHNVRETLAICEKAYIVSEGAVIAEGTPQEILENETVRQVYLGEDF 246