Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score = 76.3 bits (186), Expect = 3e-19
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 24  IACLLASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSININADKLIVI 83
           ++  L S  A AL  DR+QP+ I +D+  LD K    T+ GDV + QGS+ I  + + + 
Sbjct: 13  LSAALGSASALALPNDRDQPIRIQADNAHLDDKQGVATYTGDVIITQGSMMIKGNTVTIT 72

Query: 84  RNAENGKIEEIEGYGNVATFSQLTDEGK--TLYGEAKELYYKVRDDELVMINKAMLSQDD 141
           R+A +G I+ +   GN+A F Q     K   + G    + Y+ + D +++ ++A +  + 
Sbjct: 73  RSA-SGDIDVVTSVGNLAYFEQQQSAAKPDKMKGWGVTIQYQSQKDLVILTDRAKVESEG 131

Query: 142 SEIRGSKIRYKISLQKLIADSDG-----KGRVSTVLQPQ 175
           +   G KI Y    Q   A   G     + R+  V+QP+
Sbjct: 132 NTTEGEKIVYNTQTQVATAGRGGNVTTPRQRIDMVIQPK 170