Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., LptA, protein essential for LPS transport across the periplasm from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  139 bits (349), Expect = 4e-38
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 3/171 (1%)

Query: 11  KYKVDMKRSHLSLIACLLA-STQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLK 69
           K+K +    +L L   LLA S  A+A++ D EQP++IDSD Q LDM+ N VTF G+V + 
Sbjct: 2   KFKTNKLSLNLMLAGSLLAASIPAFAVTGDTEQPIHIDSDQQSLDMQGNVVTFTGNVVMT 61

Query: 70  QGSININADKLIVIR-NAENGKIEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDE 128
           QG+I INADK++V R   E GK E I+GYGN ATF Q+ D GK + G A  ++Y++  D 
Sbjct: 62  QGTIKINADKVVVTRPGGEQGK-EVIDGYGNPATFYQMQDNGKPVKGHASHMHYELAKDF 120

Query: 129 LVMINKAMLSQDDSEIRGSKIRYKISLQKLIADSDGKGRVSTVLQPQAIQE 179
           +V+   A L Q DS I G KI Y +  QK+ A S+   RV+TVL P  +Q+
Sbjct: 121 VVLTGNAYLEQLDSNITGDKITYLVKEQKMQAFSEKGKRVTTVLVPSQLQD 171