Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 192 a.a., lipopolysaccharide ABC transporter substrate-binding protein LptA from Dickeya dianthicola ME23

 Score =  123 bits (308), Expect = 2e-33
 Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 2/168 (1%)

Query: 13  KVDMKRSHLSLIACLLASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGS 72
           K+++  S L   +    S  A AL+ D +QP++I SD Q LDM+ N VTF+G+V + QGS
Sbjct: 6   KINVLHSILIASSLFAVSIPALALTGDTDQPIHITSDQQALDMQGNVVTFIGNVIVTQGS 65

Query: 73  ININADKLIVIR-NAENGKIEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDELVM 131
           I   ADK++V R N + G  E IEGYGN ATF Q+ D GK + G ++++ Y++    +++
Sbjct: 66  IKAQADKVVVTRPNGQQGH-EVIEGYGNPATFYQMQDNGKPVKGHSQKMRYEMDKQLVIL 124

Query: 132 INKAMLSQDDSEIRGSKIRYKISLQKLIADSDGKGRVSTVLQPQAIQE 179
              A L Q DS ++G +I Y +  Q++ A SD   RV+TVL P  +Q+
Sbjct: 125 TGDAYLEQLDSNVKGDRITYLVQQQQMEAFSDKGKRVTTVLVPTQLQD 172