Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., lipopolysaccharide export ABC transporter periplasmic binding protein; Lipid A binding protein; LPS export and assembly protein from Escherichia coli BL21

 Score =  134 bits (337), Expect = 9e-37
 Identities = 77/171 (45%), Positives = 110/171 (64%), Gaps = 3/171 (1%)

Query: 11  KYKVDMKRSHLSLIACLLA-STQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLK 69
           K+K +    +L L + LLA S  A+A++ D +QP++I+SD Q LDM+ N VTF G+V + 
Sbjct: 2   KFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVT 61

Query: 70  QGSININADKLIVIR-NAENGKIEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDE 128
           Q +I INADK++V R   E GK E I+GYG  ATF Q+ D GK + G A +++Y++  D 
Sbjct: 62  QDTIKINADKVVVTRPGGEQGK-EVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDF 120

Query: 129 LVMINKAMLSQDDSEIRGSKIRYKISLQKLIADSDGKGRVSTVLQPQAIQE 179
           +V+   A L Q DS I+G KI Y +  QK+ A SD   RV+TVL P  +Q+
Sbjct: 121 VVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQD 171