Pairwise Alignments

Query, 179 a.a., lipopolysaccharide transport periplasmic protein LptA from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., Lipopolysaccharide export system protein LptA precursor from Alteromonas macleodii MIT1002

 Score = 83.2 bits (204), Expect = 2e-21
 Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 5/156 (3%)

Query: 28  LASTQAYALSTDREQPVYIDSDSQQLDMKSNRVTFLGDVKLKQGSININADKLIVIRNAE 87
           +AS   +A   D  QP+ I S++Q +D K+    +  DV + QGS+ I AD++ VI    
Sbjct: 16  IASGAVHASEDDFSQPIKIGSNTQFIDGKNKTALYKDDVLITQGSLVIEADEVEVIATDG 75

Query: 88  NGKIEEIEGYGNVATFSQLTDEGKTLYGEAKELYYKVRDDELVMINKAMLSQDDSEIRGS 147
            G+ E     G  A++SQ  ++G  +  +A E+ Y+V +  + +   A L QD S+++G 
Sbjct: 76  GGR-EIFIARGKPASYSQQLEDGTPVSAKANEIRYEVVNRTISLAGNAELKQDTSKVQGD 134

Query: 148 KIRYKISLQKLI----ADSDGKGRVSTVLQPQAIQE 179
            I + +  ++L+    A  DG+GRV+TV  P+ I++
Sbjct: 135 NITFDMITEQLLATGGAGKDGEGRVTTVFTPETIRK 170