Pairwise Alignments

Query, 187 a.a., LPS export ABC transporter periplasmic protein LptC from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., Uncharacterized protein YrbK clustered with lipopolysaccharide transporters from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 86.7 bits (213), Expect = 2e-22
 Identities = 50/183 (27%), Positives = 91/183 (49%)

Query: 1   MSLSRIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNLELPMFSGENLENISYDEQGIRNY 60
           MS +R   ++LL +A   L  +   ++D    V  N   P +  E+ + + Y  +G  +Y
Sbjct: 1   MSKTRRWVIILLSLAILVLIGINLADKDDPAAVMVNSNDPTYKSEHTDTVVYSPEGALSY 60

Query: 61  VITSIHLDHYAKSGNTLFKAPILKVYREGTLQEWEITARRGILSKDQVLTLYDDVLAKNL 120
            + + H+++++    + F  P+L  + +  +  W I A +  L+ D++L LY  V    L
Sbjct: 61  RLIAQHVEYFSDQAVSWFTQPVLTTFDKDKVPTWSIKADKAKLTNDRMLYLYGHVEVNAL 120

Query: 121 LPDSGFDTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHSAELYNQVQG 180
           +PD+    +TT    I L ++D  ++  V L G  F + G  M+GN    +AEL  +V+ 
Sbjct: 121 VPDAQLRRITTDNAQINLVTQDVTSNDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT 180

Query: 181 RYE 183
            YE
Sbjct: 181 SYE 183