Pairwise Alignments

Query, 187 a.a., LPS export ABC transporter periplasmic protein LptC from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., Uncharacterized protein conserved in bacteria from Enterobacter asburiae PDN3

 Score = 84.7 bits (208), Expect = 9e-22
 Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 1/179 (0%)

Query: 5   RIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNLELPMFSGENLENISYDEQGIRNYVITS 64
           R + +LL  +A   +   L    D++ +V  N + P +  ++ + + Y  +G  NY + +
Sbjct: 6   RWIIILLSLVALVLIGVNLADRDDTQTEVVNNND-PTYKSDHSDTVVYSPEGALNYRLIA 64

Query: 65  IHLDHYAKSGNTLFKAPILKVYREGTLQEWEITARRGILSKDQVLTLYDDVLAKNLLPDS 124
            H+++++  G + F  P++  + +  +  W I + R  L+ D++L LY  V    L  DS
Sbjct: 65  QHVEYFSDDGISWFTQPVMTTFDKDKVPTWSIKSDRAKLTNDRMLYLYGHVEVNALTADS 124

Query: 125 GFDTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHSAELYNQVQGRYE 183
               +TT    I L ++D  +   V L G  F + G  M+GN    +AEL  +V+  YE
Sbjct: 125 QLRKITTDNAQINLVTQDVTSQDLVTLYGTTFNSSGLRMRGNLRSKNAELIEKVRTSYE 183