Pairwise Alignments

Query, 187 a.a., LPS export ABC transporter periplasmic protein LptC from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., LPS export ABC transporter periplasmic protein LptC from Escherichia coli ECRC62

 Score = 91.7 bits (226), Expect = 7e-24
 Identities = 51/183 (27%), Positives = 93/183 (50%)

Query: 1   MSLSRIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNLELPMFSGENLENISYDEQGIRNY 60
           MS +R   +++L +A   +  +   E+D   QV  N   P +  E+ + + Y+ +G  +Y
Sbjct: 1   MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSY 60

Query: 61  VITSIHLDHYAKSGNTLFKAPILKVYREGTLQEWEITARRGILSKDQVLTLYDDVLAKNL 120
            + + H+++Y+    + F  P+L  + +  +  W + A +  L+ D++L LY  V    L
Sbjct: 61  RLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNAL 120

Query: 121 LPDSGFDTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHSAELYNQVQG 180
           +PDS    +TT    I L ++D  ++  V L G  F + G  M+GN    +AEL  +V+ 
Sbjct: 121 VPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT 180

Query: 181 RYE 183
            YE
Sbjct: 181 SYE 183