Pairwise Alignments

Query, 187 a.a., LPS export ABC transporter periplasmic protein LptC from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., periplasmic membrane-anchored LPS-binding protein; LPS export protein from Escherichia coli BL21

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 50/183 (27%), Positives = 93/183 (50%)

Query: 1   MSLSRIVYVLLLFIASWSLYYLLGQEQDSKIQVAPNLELPMFSGENLENISYDEQGIRNY 60
           MS +R   +++L +A   +  +   E+D   Q+  N   P +  E+ + + Y+ +G  +Y
Sbjct: 1   MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQMVVNNNDPTYKSEHTDTLVYNPEGALSY 60

Query: 61  VITSIHLDHYAKSGNTLFKAPILKVYREGTLQEWEITARRGILSKDQVLTLYDDVLAKNL 120
            + + H+++Y+    + F  P+L  + +  +  W + A +  L+ D++L LY  V    L
Sbjct: 61  RLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNAL 120

Query: 121 LPDSGFDTLTTSEMSIQLKSRDFWADKPVELRGPQFETHGQAMKGNFADHSAELYNQVQG 180
           +PDS    +TT    I L ++D  ++  V L G  F + G  M+GN    +AEL  +V+ 
Sbjct: 121 VPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT 180

Query: 181 RYE 183
            YE
Sbjct: 181 SYE 183