Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  114 bits (285), Expect = 3e-30
 Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 2/222 (0%)

Query: 29  LVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQM 88
           ++ RP+  R F  +V Q+  +G +++ II++    IG +L+ QG      +GA+  +  M
Sbjct: 146 VLARPRSFR-FTSMVNQVDRVGFRAVPIILLITFLIGCILAQQGIFNFRRFGADIYVVDM 204

Query: 89  VALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWA 148
           V + +LRELG ++ +++ AGR+GSA TAE+G M+  E++ +L +M  DP++ ++ PR  A
Sbjct: 205 VGVLVLRELGVLIVSIMIAGRSGSAYTAELGSMRMREEIDALRVMGFDPIEVLVVPRILA 264

Query: 149 GVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFA 208
            +I++PLL  I     I+G  LV   + GI    F   ++ +++L Q       K    A
Sbjct: 265 LIIALPLLTFIGSMSAIFGAGLVSWGYGGITPDVFLDRLKLAIDLDQ-FKVGMYKAPFMA 323

Query: 209 FTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLDFV 250
            T+  +A   G     ++E +   TT +VV +   V+ +D V
Sbjct: 324 ATIGLVACMEGLRVGGSAESLGEHTTASVVKAIFLVIVMDGV 365