Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  330 bits (846), Expect = 2e-95
 Identities = 168/251 (66%), Positives = 203/251 (80%)

Query: 8   GQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMV 67
           G+  + + E  GR+++ LF AL+GR      F LL++QL+S+GV SL II+VSG+FIGMV
Sbjct: 14  GRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQLHSVGVMSLVIIVVSGVFIGMV 73

Query: 68  LSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQL 127
           L+LQG+ IL  YG+E ++GQMVAL+LLRELGPVVTALLFAGRAGSALTAEIG MK+TEQL
Sbjct: 74  LALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMKSTEQL 133

Query: 128 SSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAM 187
           SSLEM+ VDPLK ++APR WAG IS+PLLAMIF  VGIWGG  V VDW G+  GS+W+ M
Sbjct: 134 SSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGSWVAVDWLGVYDGSYWANM 193

Query: 188 QASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGL 247
           Q SV    D+ N  IK +VFAF VTWIA+F GYD  PTSEGISRATT+TVV++SLAVLGL
Sbjct: 194 QNSVTFSGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSEGISRATTKTVVYASLAVLGL 253

Query: 248 DFVLTALMFGN 258
           DF+LTALMFG+
Sbjct: 254 DFILTALMFGD 264