Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., ABC transporter, permease protein (cluster 9, phospholipid) from Sphingobium sp. HT1-2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 18  FGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILV 77
           FG   + ++G L+  P   R    +V++   +GV +L II +    IG+V++ QG V L 
Sbjct: 130 FGGVLVTVWG-LIRHPSRFR-INAVVQRFEVVGVSALGIIGLMSFLIGIVIAQQGAVQLR 187

Query: 78  DYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDP 137
            +G E     +V     RELG ++TA++ AGR+GSA  A++G MK TE++ ++  + V P
Sbjct: 188 QFGMEMLTINLVGRLTFRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVDAMRTIGVSP 247

Query: 138 LKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDI 197
           ++ ++ PR  A V+ MPLL      + I GG  +      I   +F   ++  V +  D+
Sbjct: 248 MEALVLPRTLAVVVMMPLLGFYSSIIAIIGGGFLCAVSLDIPPITFVQRLREVVPI-HDL 306

Query: 198 GNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLAVLGLD 248
               IK  VF   +     F G      +E +   TT  VV +   V+ LD
Sbjct: 307 WVGLIKAPVFGLIIGISGCFQGMQVKANAEEVGLRTTAAVVQAIFLVIVLD 357