Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  129 bits (325), Expect = 5e-35
 Identities = 81/259 (31%), Positives = 141/259 (54%), Gaps = 8/259 (3%)

Query: 3   WVSSVGQRTLAVSETFGRASLMLFGALVG------RPQPIRHFPLLVRQLYSIGVQSLAI 56
           ++  +G+R +A    FG  + +L  +L        R QP+R  P+ V Q   IG+ +L I
Sbjct: 13  FLDRLGRRAVAGIVEFGFGASLLGESLYWLGMGGKRRQPVRLAPV-VAQAMEIGIGALPI 71

Query: 57  IIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTA 116
           + V    IG++L++QG   L  +GAE+ +   VA+S++RE GP++T +L AGR+GSAL A
Sbjct: 72  VTVLSATIGIMLAIQGIYTLRLFGAESRVSLGVAMSVVREFGPLITGILVAGRSGSALAA 131

Query: 117 EIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWK 176
            +G M+  +++ +L +M V P++ ++ P   A +  +P L +    VG++   L      
Sbjct: 132 RLGTMRINQEIDALTVMGVSPVRFLVVPPLLAMMAMLPALTLWSDLVGLFAAGLYIAPQL 191

Query: 177 GIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRT 236
           G   G++   M   V L  DI +   K  +F+  +T + + NG      +EG+ R TTR+
Sbjct: 192 GSSMGAYVDEMTDLVRL-NDIWHGLGKSAIFSVLITVVGVVNGASVTGGAEGVGRMTTRS 250

Query: 237 VVHSSLAVLGLDFVLTALM 255
           VVH+  A++  D +   ++
Sbjct: 251 VVHAISAIVITDMIFVFMV 269