Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Uncharacterized ABC transporter, permease component YrbE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  380 bits (976), Expect = e-110
 Identities = 192/255 (75%), Positives = 220/255 (86%)

Query: 4   VSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLF 63
           ++++G   +    TFGRA LMLF A++G+P+  +H PLLVRQLY++GV S+ IIIVSG+F
Sbjct: 6   LAALGHSGIKTVRTFGRAGLMLFNAIIGKPEFRKHAPLLVRQLYNVGVLSMLIIIVSGVF 65

Query: 64  IGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 123
           IGMVL LQGY++L  Y AETSLG +VALSLLRELGPVV ALLFAGRAGSALTAEIGLM+A
Sbjct: 66  IGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRA 125

Query: 124 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 183
           TEQLSS+EMMAVDPL+RVI+PRFWAGVIS+PLL +IF+AVGIWGG LVGV WKGID G F
Sbjct: 126 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWKGIDAGFF 185

Query: 184 WSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 243
           WSAMQ +V+   D+ N  IK VVFA TVTWIALFNGYDAIPTS GISRATTRTVVH+SLA
Sbjct: 186 WSAMQNAVDWRMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATTRTVVHASLA 245

Query: 244 VLGLDFVLTALMFGN 258
           VLGLDFVLTALMFGN
Sbjct: 246 VLGLDFVLTALMFGN 260