Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein from Escherichia coli BL21

 Score =  384 bits (985), Expect = e-111
 Identities = 194/255 (76%), Positives = 221/255 (86%)

Query: 4   VSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVSGLF 63
           ++S+G + +    TFGRA LMLF ALVG+P+  +H PLLVRQLY++GV S+ II+VSG+F
Sbjct: 6   LASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVF 65

Query: 64  IGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKA 123
           IGMVL LQGY++L  Y AETSLG +VALSLLRELGPVV ALLFAGRAGSALTAEIGLM+A
Sbjct: 66  IGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRA 125

Query: 124 TEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDHGSF 183
           TEQLSS+EMMAVDPL+RVI+PRFWAGVIS+PLL +IF+AVGIWGG LVGV WKGID G F
Sbjct: 126 TEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFF 185

Query: 184 WSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHSSLA 243
           WSAMQ +V+   D+ N  IK VVFA TVTWI+LFNGYDAIPTS GISRATTRTVVHSSLA
Sbjct: 186 WSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLA 245

Query: 244 VLGLDFVLTALMFGN 258
           VLGLDFVLTALMFGN
Sbjct: 246 VLGLDFVLTALMFGN 260