Pairwise Alignments

Query, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  112 bits (280), Expect = 1e-29
 Identities = 65/207 (31%), Positives = 118/207 (57%), Gaps = 1/207 (0%)

Query: 42  LVRQLYSIGVQSLAIIIVSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVV 101
           +V Q+  +GV+++ II++    IG +++ QG   L  +GAE  +  +V +  LRE+G ++
Sbjct: 169 IVNQIDHMGVRAVPIIMLMSFLIGAIIAQQGAFQLRYFGAEVFVVDLVGILQLREIGVLL 228

Query: 102 TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFM 161
           TA++ AGR+GSA+TAEIG MK  E++ +L+++ ++P+  ++ PR  A  I++PLL ++  
Sbjct: 229 TAIMIAGRSGSAITAEIGSMKMREEIDALKVIGLNPVGVLVFPRLVALTIALPLLTILAN 288

Query: 162 AVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYD 221
              ++G  +V + + GI    F S +  +VE    I    IK    A  +  +A   G  
Sbjct: 289 FAALFGAAIVALAYSGITFEVFLSRLHGAVE-ESTIAAGMIKAPFMALIIGIVAAVEGMK 347

Query: 222 AIPTSEGISRATTRTVVHSSLAVLGLD 248
              ++E + +  T +VV S   V+ +D
Sbjct: 348 VGGSAESLGKHVTSSVVKSIFVVILVD 374