Pairwise Alignments

Query, 309 a.a., aspartate carbamoyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., aspartate carbamoyltransferase catalytic subunit from Pseudomonas simiae WCS417

 Score =  145 bits (365), Expect = 2e-39
 Identities = 106/314 (33%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 8   KHIISIAELSRAELELIVKTAGQL-----KAQPNPELIKHKVVASCFFEPSTRTRLSFET 62
           +H +S+  L R  L  I+ TA        +A     L++ K + + FFE STRTR +FE 
Sbjct: 19  QHFLSLDGLPRELLTEILDTADSFLEVGGRAVKKVPLLRGKTICNVFFENSTRTRTTFEL 78

Query: 63  AIQRIGGSVIGFDNGGNTSLAKKGETLADSVRVISSYV-DAFVMRHPQEGAAR-LASEFS 120
           A QR+   VI  +   +TS A KGETL D++R + +   D FV+RH   GAA  +A    
Sbjct: 79  AAQRLSADVITLNV--STSSASKGETLLDTLRNLEAMAADMFVVRHGDSGAAHFIAEHVC 136

Query: 121 NGVPVINAGDGSNQHPSQTLLDLYSIFETQGRLDNLDVAFVGDLKYGRTVHSLAQALAKF 180
             V +IN GDG + HP+Q +LD+ +I   +G  +NL VA VGD+ + R   S   AL   
Sbjct: 137 PQVAIINGGDGRHAHPTQGMLDMLTIRRHKGSFENLSVAIVGDILHSRVARSNMLALKAL 196

Query: 181 DNNRFYFVAPEALAMPDYICEELDEAGVKYQVFSDMESVIPELDILYMTRVQKERF---- 236
                  +AP+ L     +   +++ GVK  V++DM   + ++D++ M R+Q+ER     
Sbjct: 197 GCPDIRVIAPKTL-----LPIGIEQYGVK--VYTDMAEGLKDVDVVIMLRLQRERMAGGL 249

Query: 237 --DESEYAHIKSAYILTAAHLSDARSNLKVLHPLP--RVDEITTDVDKTPHAYYFEQVEN 292
              E E+  +   + LT A L+ A+ +  V+HP P  R  EI + V   P +    QV  
Sbjct: 250 LPSEGEFYRL---FGLTTARLAGAKPDAIVMHPGPINRGVEIESAVADGPQSVILNQVTY 306

Query: 293 GVYAREALLALVLN 306
           G+  R A+L++ ++
Sbjct: 307 GIAVRMAVLSMAMS 320