Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score = 52.0 bits (123), Expect = 9e-11
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 490 DSRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAA 549
           D +   L + V+ +   +  V  +      +L ++L ER+G+R T  H   S  ER KA 
Sbjct: 234 DDKRRALKQIVRQRGITQAFVFVNSKLGCARLARSL-ERDGLRTTALHGDKSQDERLKAL 292

Query: 550 AYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIG 603
           A F  + G   +L+C+++ + G + +    +  FD+PFN +    RIGR  R G
Sbjct: 293 ASF--KAGEVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAG 344