Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., DEAD/DEAH box helicase from Variovorax sp. OAS795

 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 527 EREGIRATVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLP 586
           ER+G+R T  H   S  ER KA A F  + G   +L+C+++ + G + +    +  FD+P
Sbjct: 270 ERDGLRTTALHGDKSQDERLKALASF--KAGEVDLLVCTDVAARGLDIKDVPAVFNFDIP 327

Query: 587 FNPDLLEQRIGRLDRIG 603
           FN +    RIGR  R G
Sbjct: 328 FNAEDYVHRIGRTGRAG 344