Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 496 LLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQE 555
           +++ ++ +  ++++V  +    A +L + L ER+G+ AT  H   S  ER +A   F  +
Sbjct: 248 VVQLIRERSLKQVIVFCNSKIGASRLARQL-ERDGVVATAIHGDRSQNERMQALDAF--K 304

Query: 556 EGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRD 607
            G  + L+ +++ + G +      ++ FDLPFN +    RIGR  R G   D
Sbjct: 305 RGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGD 356