Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 45.8 bits (107), Expect = 5e-09
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 500 VKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQEEGGA 559
           +K    +++LV  S   TA  L   L  + GI A   H   S   R  A   F  + G  
Sbjct: 239 IKHHSLQQVLVFVSATRTADNLVDKLN-KNGIEAAAMHSKKSQGARTDALTKF--KAGKL 295

Query: 560 QVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIG 603
           +VL+ +++ S G + Q    ++ +DLP +P     RIGR  R G
Sbjct: 296 RVLVATDLASRGIDIQLLPHVINYDLPRSPKDYVHRIGRTGRAG 339