Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 527 EREGIRATVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLP 586
           EREG+  T  H   S  ER KA   F  + G   +L+C+++ + G + +    +  FD+P
Sbjct: 270 EREGLNTTALHGDKSQDERLKALEAF--KTGAVDLLVCTDVAARGLDIKDVPAVFNFDIP 327

Query: 587 FNPDLLEQRIGRLDRIG 603
           FN +    RIGR  R G
Sbjct: 328 FNAEDYVHRIGRTGRAG 344