Pairwise Alignments

Query, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ATP-dependent RNA helicase RhlE from Azospirillum sp. SherDot2

 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 510 VIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGS 569
           +  +R      L+++L ER G      H  M   +R +    F Q  G   +L+CS++ +
Sbjct: 247 IFCNRKRDIAVLQKSL-ERHGFNVGALHGDMVQSKRTETLERFKQ--GEITLLVCSDVAA 303

Query: 570 EGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQK 605
            G + Q  + +  FD+P  PD    RIGR  R G++
Sbjct: 304 RGIDVQGLSHVFNFDVPLTPDDYVHRIGRTGRAGKQ 339