Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Rhodanobacter sp000427505 FW510-R12

 Score = 95.9 bits (237), Expect = 9e-25
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 27/217 (12%)

Query: 10  KDPWIDVIYEDEHIIAANKPSGLLSVPG---------RPVEHYDSMWARLVDYCPDVKVV 60
           +D  + +++EDEH++  +KP+GL+  PG           + H+D   A L    P   +V
Sbjct: 78  EDIALAIVHEDEHLLVLDKPAGLVVHPGAGNPAGTLLNALLHHDPRLAEL----PRAGIV 133

Query: 61  HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWP 120
           HRLD  TSGL++ A+     +AL          + Y A V G +    G V+ P+     
Sbjct: 134 HRLDKDTSGLMVVARTLPTYTALVDLLSRHEVERQYEAVVLGTLVAG-GTVDAPIGRSLG 192

Query: 121 NRPKQKVCFEE-GRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDL 179
           +R +Q V  EE G+ ++T Y+V +R    ++++    TGR+HQ+RVH+  + HP+VGD L
Sbjct: 193 DRLRQAVRDEEDGKRAVTHYRVRERFRAHSLLQCRLETGRTHQIRVHLAHISHPLVGDPL 252

Query: 180 YA------PPEAVEFADRLQ------LHAAELCFYHP 204
           Y          + E A  L+      LHA +L F HP
Sbjct: 253 YGGGLKLPKGASAELAAALRGFRRQALHAEQLAFIHP 289