Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Ribosomal large subunit pseudouridine synthase C from Xanthobacter sp. DMC5

 Score =  100 bits (250), Expect = 3e-26
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 11/209 (5%)

Query: 17  IYEDEHIIAANKPSGLLSVPGRPV-EHYDSMWARLVDYCPDV-KVVHRLDMSTSGLILFA 74
           ++ED+ ++  NKP GL    G     H D +   L D      ++VHR+D  TSG +L A
Sbjct: 129 LFEDKDVMVLNKPFGLAVQGGSGTYRHVDGLLEALKDRDGQKPRLVHRIDKDTSGCLLIA 188

Query: 75  KGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVC---FEE 131
           K +   S L K F+ R   K+Y+A V GV +  +G ++  L  D  +  K +V     +E
Sbjct: 189 KSRLAASVLAKSFRSREARKVYWAVVPGVPKPRQGRISTYLARD-EDEEKMRVARHGEDE 247

Query: 132 GRDSLTRYQVV-KREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVE--- 187
              ++T Y VV +  +K + + L P+TGR+HQLR H+  + HPI+GD  Y   E  E   
Sbjct: 248 ASHAITYYAVVDQAAQKMSWLSLKPVTGRTHQLRAHLAHIHHPILGDPKYFDIENWELPG 307

Query: 188 -FADRLQLHAAELCFYHPRSHWLRTLFVP 215
              +RL L A  L   HPR + +  +  P
Sbjct: 308 GLQNRLHLLARRLVIPHPRGNGVIDVSAP 336