Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

 Score =  164 bits (416), Expect = 1e-45
 Identities = 88/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-CPDVKVVHRLDMSTSGLIL 72
           I ++Y+D+ ++  NKP+ LLSVPGR  ++ D +  RL +   P+ ++VHRLD  TSG+IL
Sbjct: 6   IHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65

Query: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132
            A+       L +QF  R T K Y A  WG  E + G ++LPL  D P +P+  V  E G
Sbjct: 66  LARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFG 125

Query: 133 RDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFADRL 192
           + +LT ++V++R      V L PITGRSHQLRVHM S+GHP++GD LYA  +A+    RL
Sbjct: 126 KHALTFWKVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPRL 185

Query: 193 QLHAAELCFYHPRS 206
            LHA+ L F HP+S
Sbjct: 186 CLHASMLSFTHPQS 199