Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 6e-31
 Identities = 73/213 (34%), Positives = 115/213 (53%), Gaps = 10/213 (4%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWA--RLVDYCPDVKVVHRLDMSTSGLILF 73
           ++YED+H++  NKPSG  +V G    H+ ++ A   L      +++VHR+D  TSG++L 
Sbjct: 97  IVYEDDHLLILNKPSGT-AVHGGSGLHFGAIEALRALRPQARFLELVHRIDRDTSGILLV 155

Query: 74  AKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEGR 133
           AK +     L+ QF+ +   K YYA V G  +     VN PL  +  N   +      G+
Sbjct: 156 AKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVR--VNPNGK 213

Query: 134 DSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFA---- 189
            S TR++++++  + T+V+  P+TGR+HQ+RVH Q +GHPI  DD Y       +     
Sbjct: 214 PSETRFRILEKFAEATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFG 273

Query: 190 -DRLQLHAAELCFYHPRSHWLRTLFVPCDFYPE 221
            +RL LHAA + F HP S     +  P + + E
Sbjct: 274 IERLFLHAANIQFVHPASEKKLEIHAPLEAHLE 306