Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 21/210 (10%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRP----------VEHYDSMWARLVDYCPDVKVVHRL 63
           +D+++ED  +I  +KP+GL+  P             + H D   + +        +VHR+
Sbjct: 84  LDIVHEDADLIVVDKPAGLVVHPAAGNLDGTLVNALLHHCDGQLSGIGGVARP-GIVHRI 142

Query: 64  DMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRP 123
           D  TSGL++ AK       L +QF+     ++Y A V+G+     G V+  +     +R 
Sbjct: 143 DKDTSGLLVVAKSDKAHEGLARQFKDHSIDRLYAAIVYGIPAPGSGTVDAWIGRSDADRK 202

Query: 124 KQKVCFE-EGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAP 182
           K  V  E  G+ ++T Y+V++R     +V     TGR+HQ+RVHM  LGHP++GD +Y  
Sbjct: 203 KMAVHREGRGKHAVTHYRVMERLRGAAMVECRLETGRTHQVRVHMAHLGHPLIGDPVYGR 262

Query: 183 P--------EAVEFADRLQLHAAELCFYHP 204
                    E + F  R  LHA  L F HP
Sbjct: 263 DRKGFKSILETLGF-KRQALHAKRLGFIHP 291