Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., 23S rRNA (746) and tRNA (32) pseudouridine synthase from Pseudomonas putida KT2440

 Score =  166 bits (420), Expect = 3e-46
 Identities = 89/194 (45%), Positives = 122/194 (62%), Gaps = 1/194 (0%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-CPDVKVVHRLDMSTSGLIL 72
           + +++ED  I+  NKP+ LLSVPGR  ++ D +  RL +   PD  +VHRLD  TSG+IL
Sbjct: 6   VQILFEDAAILVINKPTLLLSVPGRAEDNKDCLITRLQENGYPDALIVHRLDWETSGIIL 65

Query: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132
            A+       L +QF  R T K Y A  WG    + G ++LPL  D P +P+  V  E+G
Sbjct: 66  LARDADSHRELSRQFHDRETEKAYTALCWGQPALDSGSIDLPLRYDPPTKPRHVVDHEQG 125

Query: 133 RDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFADRL 192
           + +LT +++V+R      V L PITGRSHQLRVHM S+GHP++GD LYA P+A+   +RL
Sbjct: 126 KHALTFWRIVERCGDHCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYANPQALAAHERL 185

Query: 193 QLHAAELCFYHPRS 206
            LHA+ L F HP S
Sbjct: 186 CLHASMLSFTHPVS 199