Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 6e-29
 Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 21/213 (9%)

Query: 10  KDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVK------VVHRL 63
           +D  +D++YED+HI+  NKP+GL+  P        ++   L+ + PD+       +VHRL
Sbjct: 79  EDIELDIVYEDDHILVINKPAGLVVHPAAG-HASGTLLNALLHHVPDIVNVPRAGIVHRL 137

Query: 64  DMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRP 123
           D  T+GL++ AK    ++ L +Q Q R   +IY   V GV+    G+++ P+      R 
Sbjct: 138 DKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGVVTAG-GKIDAPIGRHGGMRQ 196

Query: 124 KQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYA-- 181
           +  V  + G+ +++ Y+V+KR    T VR+   TGR+HQ+RVHM  +G P+VGD  Y   
Sbjct: 197 RMAVT-DGGKPAVSHYRVLKRFRSHTHVRVKLETGRTHQIRVHMAHVGFPLVGDQTYGGR 255

Query: 182 ---PP-------EAVEFADRLQLHAAELCFYHP 204
              PP       EAV+   R  LHA  L   HP
Sbjct: 256 FRIPPAASPTMVEAVKTFPRQALHARFLALAHP 288