Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  102 bits (255), Expect = 7e-27
 Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPV--EHYDSMWARLVDYCPDVKVVHRLDMSTSGLILF 73
           V+Y D+ +IA NKP GL    G  +  +H D+    L       K+VHRLD  TSG++L 
Sbjct: 94  VLYMDDEVIALNKPPGLAVQGGTGMADKHLDAWLDALCFDGGRPKLVHRLDKDTSGVLLL 153

Query: 74  AKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCF--EE 131
            +  +  + L   F+ R   K Y+A V GV    +G ++ PL    P +  +KV    E+
Sbjct: 154 GRTANATAKLAAAFKSRSARKCYWALVAGVPRYPQGRIDAPL-AKLPGKAGEKVAVDKED 212

Query: 132 GRDSLTRYQVVKREEKTTV-VRLIPITGRSHQLRVHMQSLGHPIVGDDLY----APPEAV 186
           G+ ++T Y+VV    K    + L P TGR+HQLR H   LG PI+GD  Y    A  E  
Sbjct: 213 GKHAVTYYRVVDATLKRAAWLELEPRTGRTHQLRAHCLLLGTPIMGDGKYGGQDALVEGT 272

Query: 187 EFADRLQLHAAELCFYHPRS 206
             + +L LHA  +   HPR+
Sbjct: 273 GVSRKLHLHARAVRLPHPRT 292