Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., 23S rRNA pseudouridylate synthase (NCBI) from Escherichia coli BW25113

 Score =  107 bits (268), Expect = 2e-28
 Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWAR-LVDYCPDVKVVHRLDMSTSGLILFA 74
           ++YED+HI+  NKPSG     G  +        R L      +++VHRLD  TSG++L A
Sbjct: 95  ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVA 154

Query: 75  KGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKV-CFEEGR 133
           K +    +L +Q + +   K Y A V G  + +   V  PL  +     ++ V   +EG+
Sbjct: 155 KKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGK 214

Query: 134 DSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAP-------PEAV 186
            S TR++V +R    T+VR  P+TGR+HQ+RVH Q  GHPI  DD Y          EA 
Sbjct: 215 PSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAG 274

Query: 187 EFADRLQLHAAELCFYHPRSHWLRTLFVPCD 217
              +RL LHAA L F HP +  +  +  P D
Sbjct: 275 TGLNRLFLHAAALKFTHPGTGEVMRIEAPMD 305