Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) from Escherichia coli BW25113

 Score =  233 bits (595), Expect = 2e-66
 Identities = 120/219 (54%), Positives = 145/219 (66%), Gaps = 1/219 (0%)

Query: 1   MAMTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVV 60
           M M  YNPP++PW+ ++Y+D+HI+  NKPSGLLSVPGR  EH DS+  R+    P  + V
Sbjct: 1   MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV 60

Query: 61  HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWP 120
           HRLDM+TSG+I+ A  K  E  LK+QF+ R   K Y ARVWG     EG V+LPL CDWP
Sbjct: 61  HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP 120

Query: 121 NRPKQKVCFEEGRDSLTRYQVVK-REEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDL 179
           NRPKQKVC+E G+ + T Y+VV+   + T  V L PITGRSHQLRVHM +LGHPI+GD  
Sbjct: 121 NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF 180

Query: 180 YAPPEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDF 218
           YA PEA   A RL LHA  L   HP      T   P DF
Sbjct: 181 YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF 219