Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Erwinia tracheiphila SCR3

 Score =  231 bits (590), Expect = 7e-66
 Identities = 114/217 (52%), Positives = 146/217 (67%), Gaps = 1/217 (0%)

Query: 3   MTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHR 62
           M  YNPP++PW+ V+Y+D+HII  NKPSGLLSVPGR  EH DS+  R+    P  + VHR
Sbjct: 1   MEPYNPPQEPWLHVLYQDQHIIVVNKPSGLLSVPGRLAEHRDSVMTRIQQAFPAAESVHR 60

Query: 63  LDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNR 122
           LDM+TSG+I+ A  K  E  LK+QF+ R   K Y ARVWG   + +G ++LPL CDWPNR
Sbjct: 61  LDMATSGVIVVALTKAAECELKRQFREREPQKTYVARVWGHPAKEKGLIDLPLICDWPNR 120

Query: 123 PKQKVCFEEGRDSLTRYQVVK-REEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYA 181
           PKQKVCFE G+ + T +QV+    + +  ++L P+TGRSHQLRVH+ +LGHPI+GD+ YA
Sbjct: 121 PKQKVCFETGKTAQTEFQVLDYAADNSARLQLKPLTGRSHQLRVHLLALGHPILGDNFYA 180

Query: 182 PPEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDF 218
             +A   A RLQLHA  L   HP      T   P DF
Sbjct: 181 HEQARAMAPRLQLHAEALTILHPAFQSAMTFRQPADF 217