Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., Pseudouridylate synthases, 23S RNA-specific from Enterobacter asburiae PDN3

 Score =  162 bits (409), Expect = 7e-45
 Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 7/206 (3%)

Query: 8   PPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDMST 67
           PP    I+++++DEH++  +KPSGLLS+ G+  ++ DS+  RLV   P   +VHRLD  T
Sbjct: 11  PPCHDDIEILWQDEHLLLIDKPSGLLSLSGKKPQNLDSVHYRLVQTFPGCTLVHRLDFGT 70

Query: 68  SGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKV 127
           SGL++ A+ K + +AL +QF  R   K Y A + G +E +EG ++ P+  D    P   +
Sbjct: 71  SGLMVVARNKAINAALCQQFSQRSVEKAYSALLCGHVENDEGVIDAPIAKDPALFPLMSI 130

Query: 128 CFEEGRDSLTRYQVVKREEKT-----TVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAP 182
           C   G+ + +RY+VV+R  ++     T V LIP TGR+HQLR+H Q LGHPI+G DLY  
Sbjct: 131 CAINGKPARSRYRVVERFYQSTGLPLTRVILIPETGRTHQLRIHCQQLGHPILGCDLYGG 190

Query: 183 PEA--VEFADRLQLHAAELCFYHPRS 206
            EA   E A RL LHA+EL F HP S
Sbjct: 191 LEAPGAEDAPRLMLHASELNFIHPVS 216