Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Escherichia coli ECRC62

 Score =  233 bits (595), Expect = 2e-66
 Identities = 120/219 (54%), Positives = 145/219 (66%), Gaps = 1/219 (0%)

Query: 1   MAMTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVV 60
           M M  YNPP++PW+ ++Y+D+HI+  NKPSGLLSVPGR  EH DS+  R+    P  + V
Sbjct: 1   MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV 60

Query: 61  HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWP 120
           HRLDM+TSG+I+ A  K  E  LK+QF+ R   K Y ARVWG     EG V+LPL CDWP
Sbjct: 61  HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP 120

Query: 121 NRPKQKVCFEEGRDSLTRYQVVK-REEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDL 179
           NRPKQKVC+E G+ + T Y+VV+   + T  V L PITGRSHQLRVHM +LGHPI+GD  
Sbjct: 121 NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF 180

Query: 180 YAPPEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDF 218
           YA PEA   A RL LHA  L   HP      T   P DF
Sbjct: 181 YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF 219