Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA from Dickeya dadantii 3937

 Score =  243 bits (619), Expect = 3e-69
 Identities = 117/203 (57%), Positives = 149/203 (73%), Gaps = 1/203 (0%)

Query: 3   MTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHR 62
           M  Y+PP+DPW+ ++Y+D+HI+  NKPSGLLSVPGR  EH DS+  R+    P  + VHR
Sbjct: 1   MEPYDPPRDPWLHILYQDQHIMVVNKPSGLLSVPGRAEEHKDSIMTRIQADFPAAESVHR 60

Query: 63  LDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNR 122
           LDM+TSG+++ A  K  E  LK+QF+ R   K Y ARVWG +EQ++G V+LPL CDWPNR
Sbjct: 61  LDMATSGVMVVALTKAAERELKRQFREREPKKSYIARVWGHLEQDDGLVDLPLICDWPNR 120

Query: 123 PKQKVCFEEGRDSLTRYQVVKRE-EKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYA 181
           PKQKVCFE+G+ + T Y V+ R+ + TT V+L+PITGRSHQLRVHM +LGHPI+GD  YA
Sbjct: 121 PKQKVCFEQGKPAQTGYVVLSRDSDGTTRVKLMPITGRSHQLRVHMLALGHPILGDGFYA 180

Query: 182 PPEAVEFADRLQLHAAELCFYHP 204
            P+A   A RL LHA EL   HP
Sbjct: 181 HPQAKAMAPRLLLHAQELAIVHP 203