Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 37/225 (16%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVD-------YCPDVK-------V 59
           +D+++ED+H++  NKP+G++  P      Y +    LV+         P++        +
Sbjct: 116 LDIVHEDDHLLVVNKPAGMVVHPA-----YGNWTGTLVNGLVYHFSQLPEMPGNSGRPGL 170

Query: 60  VHRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDW 119
           VHR+D  TSGL++ AK +   + L KQF      + Y A VWG  +++ G ++  +    
Sbjct: 171 VHRIDKDTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALVWGEPQEDAGTIDAHVGRSA 230

Query: 120 PNRPKQKVCFE--EGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGD 177
            +R    V  E  +G++++T ++V+KR    ++V+    TGR+HQ+R HM+ LGHP+  D
Sbjct: 231 RDRKVMDVFPEGDQGKNAVTHWKVLKRLRYVSLVQCNLETGRTHQIRAHMKYLGHPLFND 290

Query: 178 DLYAPPE----------------AVEFADRLQLHAAELCFYHPRS 206
            +Y   +                  +   R  LHA  L F HP S
Sbjct: 291 AVYGGDKIRKGTQFSKYKAFVNNCFKLLPRQALHAKSLGFSHPIS 335