Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., Dual-specificity RNA pseudouridine synthase RluA from Acinetobacter radioresistens SK82

 Score =  191 bits (484), Expect = 1e-53
 Identities = 99/203 (48%), Positives = 134/203 (66%), Gaps = 4/203 (1%)

Query: 6   YNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDM 65
           Y PP+ P + +IYED+ +I  +KP+GLLSVPGR  EH DS + RL++  P  K+ HRLDM
Sbjct: 9   YAPPQQP-LSIIYEDDDLIIIDKPAGLLSVPGRLPEHQDSAYLRLLEKYPHAKITHRLDM 67

Query: 66  STSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQ 125
           +TSG+++FAK +  E A+ K FQ R   K Y A + G + + +G +++PL  DW NRP+Q
Sbjct: 68  ATSGILMFAKHRDAEVAISKMFQARTVTKRYVALIQGQLNE-QGSIDVPLITDWENRPRQ 126

Query: 126 KVCFEEGRDSLTRYQVVK--REEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPP 183
            V FE G+ + T +QV++   E   T V L PITGRSHQLRVHMQ +GHPI+GD LY P 
Sbjct: 127 IVHFELGKSAKTLFQVLQYHEEHDMTRVLLTPITGRSHQLRVHMQYIGHPIMGDKLYHPE 186

Query: 184 EAVEFADRLQLHAAELCFYHPRS 206
               +  R+ LHA+ L F  P S
Sbjct: 187 PGGFYLRRMALHASYLAFQQPLS 209