Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Ribosomal large subunit pseudouridine synthase C from Acinetobacter radioresistens SK82

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 7/189 (3%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDMSTSGLILFAK 75
           VIYEDE ++  NKPSG+    G  V +      R       +++VHR+D  TSGL++ +K
Sbjct: 97  VIYEDEGLMVVNKPSGIAVHGGSGVAYGLIEGLRAATGKKYLELVHRIDRDTSGLVMISK 156

Query: 76  GKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLC-CDWPNRPKQKVCFEEGRD 134
            + +   L+   +     K Y A V G +  ++  ++ PL   +  N  ++    +EG+D
Sbjct: 157 KRSVLKTLQDLLREHKIKKTYAAIVKGQVSLDQQLIDAPLYRYELANGERRVRVSKEGKD 216

Query: 135 SLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFAD---- 190
           S T++ V +R    T+V   P++GR+HQ+RVH  S+GHP+VGDD Y      E+      
Sbjct: 217 SKTQWNVAERFMHATLVYASPLSGRTHQIRVHGLSIGHPLVGDDKYG--HETEYKGPKPR 274

Query: 191 RLQLHAAEL 199
           RL LHA  L
Sbjct: 275 RLCLHAIRL 283