Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., valyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  890 bits (2299), Expect = 0.0
 Identities = 470/983 (47%), Positives = 609/983 (61%), Gaps = 88/983 (8%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDA--YSIMIPPPNVTGSLHMGHAFQDTI 58
           +EKTY+  S+E  + K W+E   F+   +    A  ++I+IPPPNVTGSLHMGHA  +T+
Sbjct: 2   LEKTYDSASVEPKIAKAWDEANAFRAGANAKPGAETFTIVIPPPNVTGSLHMGHALNNTL 61

Query: 59  MDTLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWK 118
            D L+R +RM+GK+ LWQ G DHAGIATQMVVERK+   +   + + GR+AF++K+WEWK
Sbjct: 62  QDILVRFERMRGKDVLWQPGMDHAGIATQMVVERKLMENQLPGRREMGREAFVEKVWEWK 121

Query: 119 AESGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPK 178
           AESGG I  QL+RLGAS DW RERFTMD+G  +AV EVFV LYK +LIY+ KRLVNWDPK
Sbjct: 122 AESGGLIFNQLKRLGASCDWSRERFTMDEGLSEAVLEVFVTLYKQNLIYKAKRLVNWDPK 181

Query: 179 LHTAISDLEVENKETKGHMWHFRYPLADGVK-------TADG-------KDYIVVATTRP 224
           L TAISD+EVE  E KG++WHFRYPL  GV         ADG       +DYIVVATTRP
Sbjct: 182 LQTAISDMEVEQIEVKGNLWHFRYPLEKGVTYEYPVAFDADGTPTEFETRDYIVVATTRP 241

Query: 225 ETMLGDTGVAVNPEDPRYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDF 284
           ETMLGDTGVAVNPED RYK ++GK +ILPIVGR+IPIV D++AD   GTG VKITPAHDF
Sbjct: 242 ETMLGDTGVAVNPEDERYKGIVGKHVILPIVGRKIPIVADDYADPTAGTGAVKITPAHDF 301

Query: 285 NDYEVGKRHQLPMINILTFDA--NIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARK 342
           ND+EVGKR  L  IN++  D   +I++  +        +  +G     + +G +RF ARK
Sbjct: 302 NDFEVGKRCGLRAINVMNIDGTISIKENEDFLEGLSHPAALHGAW--DRLEGQDRFTARK 359

Query: 343 AIVAEFEELGLLQEIKDHDLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDI 402
            IV  FEE GLL +I+ H   VP+GDRGGV IEP LTDQW+V    LA+PA+ +V  G  
Sbjct: 360 IIVEIFEEAGLLDKIEPHKHVVPHGDRGGVPIEPRLTDQWWVDNKTLAQPAIASVREGRT 419

Query: 403 QFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAE----- 457
            FVPK +EN YF WM +IQ WCISRQLWWGH+IPAWY   G VFV + EEE         
Sbjct: 420 NFVPKNWENTYFQWMENIQPWCISRQLWWGHQIPAWYGPDGQVFVEKTEEEALQAAIQHY 479

Query: 458 ---------------NNIAADVALRQDDDVLDTWFSSALWTFGTLGWPEKTPELKVFHPT 502
                           N A    L +D+DVLDTWFSSALW F TLGWPE+TPEL  ++PT
Sbjct: 480 IAHEGPWKAWVEEKLENFAPGEILTRDEDVLDTWFSSALWPFSTLGWPEQTPELARYYPT 539

Query: 503 DVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNV 562
           +VLVTGFDII FWV RM+ M +HF KD+ G    PF TVY+  L+RD+NG KMSKSKGNV
Sbjct: 540 NVLVTGFDIIPFWVVRMMQMGLHFMKDDAGNPVEPFSTVYIHALVRDKNGQKMSKSKGNV 599

Query: 563 LDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAAMA 622
           +DP+++ID                                      YG D+LRFTLA MA
Sbjct: 600 IDPLELID-------------------------------------EYGADALRFTLAIMA 622

Query: 623 STGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQDCGFAAGAELEYSLADKWIESQF 682
           + GRD+  D  R+ GYRNF  KLWNA+R+  MN  ++D  F A  E      ++WI ++ 
Sbjct: 623 AQGRDVKLDPARIAGYRNFGTKLWNATRFAEMNGVKRDPHFLA--ETASLTINRWILTEL 680

Query: 683 ELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRATRRTLIT 742
              A++    ++NFR + A+  LY F+WNQFCDWYLEL KPV     E  +R ++     
Sbjct: 681 ANTARDVTAALENFRFNDASGILYRFVWNQFCDWYLELLKPVFSGEDEEAKRESQACAAY 740

Query: 743 VLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALPQYDVANFNQE-ALDDIEW 801
           VLE+  +L HP +P++TE +W       +G E D ++   L  +    F  + A  +I W
Sbjct: 741 VLEEIYKLLHPFMPFMTEELWAHTAG--EGEERDDLL--CLTDWPEPEFRDDAAAAEINW 796

Query: 802 VKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAARIEANKPVLVSLAKLESIRVLADG 861
           +   ++ IR+ RAE ++ PG    +++  AN    AR++ +   +  LA+ + IR    G
Sbjct: 797 LIDLVSGIRSARAEMNVPPGATASLVVVGANTSTEARLDRHAAAIRRLARADEIR---GG 853

Query: 862 EATP-ACATALVGKSELMIPMAGLIDKDAELDRLAKEIAKTQGEIARIEGKLGNEGFVAK 920
           +  P   A  +VG++ + +P+  L+D  AE  RL K I K   E+ RI+ KL NE FVA 
Sbjct: 854 DVAPKGSAQIIVGEATVCLPLGNLVDLAAEQARLEKAIGKVDAEMERIDKKLSNEKFVAN 913

Query: 921 APEAVITKEREKLAGYQEALVKL 943
           A   V+  ERE+ A     L  L
Sbjct: 914 ADPEVVAAERERKAELDVQLASL 936