Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., LPS export ABC transporter permease LptF from Rhodanobacter sp000427505 FW510-R12

 Score =  127 bits (318), Expect = 6e-34
 Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 5/347 (1%)

Query: 2   IIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGL 61
           I+ RY +RE  ++  A   VL ++     F +VL   ++G  P S++  ++GL       
Sbjct: 4   ILDRYFLRELAQTVAATVVVLLVIVAGSAFAKVLQQVANGSFPASVMFQVLGLRTLDGLT 63

Query: 62  LMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLA 121
            MLPL+ ++G+LL  GR+Y ESE+ V++++G+G + L+R  L L  +  ++ A  +L L 
Sbjct: 64  NMLPLASFVGVLLGLGRMYRESEMHVLSSSGMGPRGLLRPILMLGGLLVALTALVSLGLG 123

Query: 122 PWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNI--ENRKLYNVFVAQLAP 179
           PW+      L+ +         L  G F   P    ++F+D++  +  KL   FVA  + 
Sbjct: 124 PWAVRTSDALVAEANRSVIAAGLDAGRFTELPGRGGIIFVDSLSRDGSKLGRTFVASQSE 183

Query: 180 RDSILP--SVMFSHSGDVKELSDGR-QIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQ 236
                P   V+ + SG + + S+G  + I   DG +Y+      ++    +   D  +  
Sbjct: 184 GKDGPPHLKVVSAASGALYQESNGEGRFIAFKDGWQYDIPLGANNWRQMQYRRNDTSLSS 243

Query: 237 REVKSAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRF 296
            +    +    +  + +L  + D   +AE  WR +      +L +L +PLS  +PR+ ++
Sbjct: 244 VQANDDDDPAHSKSSWTLFRSVDPTDRAEFAWRANAPPLTFVLLLLALPLSRQSPREPKY 303

Query: 297 AKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAAL 343
            ++  A++ +  Y+  L+  ++ I  G       LW ++A +L  AL
Sbjct: 304 GRLLLAVVTFYLYYTLLALGRAQIGKGHWHSEAPLWALHALVLALAL 350