Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 3/197 (1%)

Query: 19  FFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLLMLPLSLYIGILLTFGR 78
           F V+  + L+Q  ++ L +    ++   +   ++      M  + LPL++ +  L+TFG 
Sbjct: 20  FTVVEFILLTQYMLKYLDELVGKDLGAEVFGELLFYFSINMAPVALPLAVLLSSLMTFGS 79

Query: 79  LYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPWSQDKEAHLMEQFAAE 138
           L    E+T +  +GI    ++R  L +       A F   ++ P +  K   L+     +
Sbjct: 80  LGEHYELTAIKTSGIALPRILRPVLIVVSFITVGAFFFNNYVVPKANLKAYSLLWDIRQK 139

Query: 139 NSVDLLQKGHFQRSPDGSSVVFIDNI-ENRKLYNVFVAQLAPRDSILPSVMFSHSGDV-K 196
                 ++G F     G S+   + + E R L +V +     +     +V+ + SG++  
Sbjct: 140 KPAMNFKEGAFYNGIPGYSIKVNEKMNEGRTLRDVMIYD-HTKGGTNTTVILADSGEMYM 198

Query: 197 ELSDGRQIITLYDGTRY 213
           + +D   ++ LYDG  Y
Sbjct: 199 DHNDSYLVLELYDGNTY 215