Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., FIG000988: Predicted permease from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  102 bits (254), Expect = 2e-26
 Identities = 74/317 (23%), Positives = 143/317 (45%), Gaps = 5/317 (1%)

Query: 9   RETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLLMLPLSL 68
           +E  +S  A   VLF + L+   IR L  AS G +    I  ++G  +      +L L+L
Sbjct: 9   KELARSFGATLVVLFTIVLTMLLIRTLGLASRGSVDPQEIALVLGYTVIGRMPTILTLAL 68

Query: 69  YIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPWSQDKE 128
           +I I+ T  R+Y +SE+ +  ++G      +R  +  +     V      ++ PW+  + 
Sbjct: 69  FIAIVFTLSRMYRDSEMIIWFSSGRSLGGFLRPVMRFSWPILVVITVMVFFVWPWANAQT 128

Query: 129 AHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFI--DNIENRKLYNVFVAQLAPRDSILPS 186
             L ++F     ++ +  G FQ S  G  V FI  D  +  +  N+F++  +  +    +
Sbjct: 129 DQLRDRFERRGDLERVAPGQFQESSSGRRVFFIDKDTADGTEGRNIFIS--STENDGRET 186

Query: 187 VMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVKSAERDW 246
           V  + SG ++ L++ +Q + L +G R E    + +  ++ F+ Y   IG   +       
Sbjct: 187 VTSARSGRIEWLNE-QQFLMLNNGQRLETPADQSNLKVSEFEEYGTQIGVSAISQRGEAL 245

Query: 247 EALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIY 306
           +A  +  L+ +  R    EL WRI + +      ++ V  +  NPR GR   +   +  +
Sbjct: 246 KARTSWDLIRDPTRANLGELGWRIGMALTALNFVLIAVATTTGNPRAGRGGNLFFTLFAF 305

Query: 307 LTYFLALSATKSAIEDG 323
           + Y+  L+  +S +  G
Sbjct: 306 VFYYNLLNLGQSWVASG 322