Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., LPS export ABC transporter permease LptF from Magnetospirillum magneticum AMB-1

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 90/354 (25%), Positives = 162/354 (45%), Gaps = 27/354 (7%)

Query: 3   IVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLL 62
           ++R ++   I    A+  VL+L   S +F+ ++ +     +     L +  L MP   ++
Sbjct: 1   MMRQMLVGMIFVSAALACVLWLT-QSLRFVEMIVNKG---LSIGAFLKLTILLMPGFLVV 56

Query: 63  MLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAP 122
           ++P+SL+  +L T+ RL A+ E+ V+ A G+ +  L R A+ L L  ++V    + W+ P
Sbjct: 57  IIPISLFAVVLFTYNRLIADRELVVLRAAGLSHLALARPAVILGLAVSAVGYMLSCWIIP 116

Query: 123 WSQDKEAHLMEQFAAENSVD--LLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180
            +  +  H M Q+   N +   LLQ+G F +  +G ++       N +L  + V     R
Sbjct: 117 VTV-RSFHEM-QWTIRNDIGNVLLQEGMFNKFGEGLTIYVRSRTPNGELTGLLVHD--KR 172

Query: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSY--DGLIGQRE 238
            +  P  + +  G +     G +++ + +G R E  P      +  FD+Y  D       
Sbjct: 173 HAQRPVTLMAERGALVYTEQGPRVL-MVNGNRQEVTPGTGKLSLLYFDNYTVDFNTATGA 231

Query: 239 VKSAERDWEALPTLSLL-------NNAD-RRAQAELQWRIS---LVVCIPLLTMLVVPLS 287
                RD     TL LL       N  + RR ++EL  R++     +  PLL   V+  S
Sbjct: 232 KHDRVRDARERSTLELLAIDSSMENKGELRRFKSELHSRLTSPLYSLGFPLLAAAVLLTS 291

Query: 288 AVNPRQGRFAKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLA 341
             + R+G+ A++  A  + +    AL+   S +  G+L   + L  INAAL +A
Sbjct: 292 GFD-RRGQTAQVITATAL-MVAVQALALGASNLSSGNL-AFVPLIYINAALPIA 342