Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., FIG000988: Predicted permease from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  281 bits (719), Expect = 2e-80
 Identities = 136/332 (40%), Positives = 218/332 (65%)

Query: 32  IRVLADASDGEIPTSMILSIVGLNMPAMGLLMLPLSLYIGILLTFGRLYAESEITVMNAT 91
           +R+L  A DG+IP +++LS++GL +P M  L+LPLSL++G+L+T G+LY ESEITVM+A 
Sbjct: 1   VRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHAC 60

Query: 92  GIGNKFLIRAALYLALITASVAAFNALWLAPWSQDKEAHLMEQFAAENSVDLLQKGHFQR 151
           G+    L++AA+ LAL T  +AA N +W  PWS   +  ++ +  A   +  L +G FQ+
Sbjct: 61  GLSKAVLVKAAMVLALFTGILAAVNVMWAGPWSSKHQDEVLAEAKANPGMAALAQGQFQQ 120

Query: 152 SPDGSSVVFIDNIENRKLYNVFVAQLAPRDSILPSVMFSHSGDVKELSDGRQIITLYDGT 211
           + +G+SV+FI++++    ++VF+AQ+ P+ +  PSV+ + SG + +L DG Q++TL  GT
Sbjct: 121 ATNGNSVLFIESVDGSDFHDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNKGT 180

Query: 212 RYEGVPTRVDYMITNFDSYDGLIGQREVKSAERDWEALPTLSLLNNADRRAQAELQWRIS 271
           R+EG     D+ IT+F +Y  +IG + V     D + +   +L N  + RA+AEL WRI+
Sbjct: 181 RFEGTALLRDFRITDFQNYQAIIGHQAVALDPNDTDQMDMRTLWNTDNDRARAELHWRIT 240

Query: 272 LVVCIPLLTMLVVPLSAVNPRQGRFAKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGL 331
           LV  + ++ ++VVPLS VNPRQGR   M PA+L+YL +FL  ++ KS    G L  +I +
Sbjct: 241 LVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSIKSNGGKGKLDPVIWM 300

Query: 332 WPINAALLLAALMVNTLDSIPVRRFKDRWKQR 363
           W +N   L  A+ +N  D++PVRR + R+ ++
Sbjct: 301 WAVNLIYLALAIGLNLWDTVPVRRLRARFLRK 332