Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., LPS export ABC transporter permease LptF from Escherichia coli ECRC62

 Score =  319 bits (818), Expect = 7e-92
 Identities = 155/363 (42%), Positives = 240/363 (66%)

Query: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           +II+RYL+RET+KSQ AI F+L L+F  QK +R+L  A DG+IP +++LS++GL +P M 
Sbjct: 1   VIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMA 60

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            L+LPLSL++G+L+T G+LY ESEITVM+A G+    L++AA+ LA+ TA VAA N +W 
Sbjct: 61  QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180
            PWS   +  ++ +  A   +  L +G FQ++ +GSSV+FI++++     +VF+AQ+ P+
Sbjct: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPK 180

Query: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240
            +  PSV+ + SG + +L DG Q++TL  GTR+EG     D+ IT+F  Y  +IG + V 
Sbjct: 181 GNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVA 240

Query: 241 SAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAKMG 300
               D + +   +L N    RA+AEL WRI+LV  + ++ ++VVPLS VNPRQGR   M 
Sbjct: 241 LDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSML 300

Query: 301 PAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMVNTLDSIPVRRFKDRW 360
           PA+L+YL +FL  ++ KS    G L   + +W +N   L  A+++N  D++PVRR +  +
Sbjct: 301 PAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASF 360

Query: 361 KQR 363
            ++
Sbjct: 361 SRK 363