Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., Lipopolysaccharide export system permease protein LptF from Acinetobacter radioresistens SK82

 Score =  167 bits (424), Expect = 3e-46
 Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 13/349 (3%)

Query: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           MII RYL+++ + +   +  +L L+ +  + I+    A+ G +  S++LSI+G  +P   
Sbjct: 1   MIIRRYLVKQVVSTSLVVIALLTLIMMGGRLIKYFGVAAQGRLDASILLSIIGYRLPEFL 60

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            L+LPL  +IG++L FGRLY + E+ V+N +GI    L R  + L L+   V +   LW+
Sbjct: 61  TLILPLGFFIGLMLVFGRLYVDHEMAVLNGSGISRNRLARLLIPLTLVYMLVQSILMLWM 120

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNI--ENRKLYNVFVAQLA 178
           +PW   +   L    A     DL++   F  S  G   ++  ++  +++ L  +F  Q A
Sbjct: 121 SPWGIRQFEQLTTSQAVRTGFDLVRPKEFISS--GPYTIYAGSLSEDHKNLKEIFFYQRA 178

Query: 179 PRDSILPSVMF--SHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQ 236
            +    P VM     +  V+ + D   ++ L  G RYE  P +  Y    F+SY   +  
Sbjct: 179 EKPG-KPDVMILAKEATRVEMMDDSANVVDLVQGRRYEIYPGQPRYSQAEFESYRLRLEN 237

Query: 237 REVKSAERDWEALPTLSLL--NNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQG 294
            +  + E D  A  T S L    AD   ++EL WRI +   I +  +L + LS V+PRQG
Sbjct: 238 DKTANFESDDVAALTTSKLWEQRADPVVESELGWRIFVPFAIMVALILAMALSEVSPRQG 297

Query: 295 RFAKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAAL 343
           R+ K+ PA+LI+ +  +AL A K+          IG+W   A LL+ A+
Sbjct: 298 RYMKLFPALLIFASLIVALMAIKTRASKDE----IGIWAYPAVLLVYAV 342