Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., LPS export ABC transporter permease LptG from Rhodanobacter sp000427505 FW510-R12

 Score =  177 bits (448), Expect = 5e-49
 Identities = 109/355 (30%), Positives = 183/355 (51%), Gaps = 12/355 (3%)

Query: 3   KILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDV 62
           K +D  +  +++ +  +V +   G   + + + QL  VG+  Y L  A+ +V+++ PR  
Sbjct: 7   KRVDRLVALSVLGSMLMVWLVLTGFDAVTQLLRQLGNVGKHGYTLSNAVAYVLVTFPRRA 66

Query: 63  EMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWG 122
              F  AAL+G L+GLG LAS+ EL  ++AAG S+L I  S       L++ V ++GE  
Sbjct: 67  YEMFGNAALIGGLLGLGGLASTGELTALRAAGMSRLRIVGSAAGVVAVLIVGVVIMGETL 126

Query: 123 APQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIA--------KVENEHLYGLNL 174
           AP   + A+ M+  A +G   M   +G+WARD  D I            V    L  + +
Sbjct: 127 APWGDQQAQAMQLRAKTGSLGMGTSSGLWARDGADVINARGTSLKQRDGVGAVQLSDVRV 186

Query: 175 WRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKES-LPEYRWRTSLAPD 233
           + F  + KLS  ++    ++    +W++ DA +T L  D + +  S      W++SL P 
Sbjct: 187 FTFGADGKLSRFVWGRTAEH-NGKQWVLHDARVTTL--DAQGTHASTAAALPWQSSLDPQ 243

Query: 234 KLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIF 293
            LA   ++P+ LS+  L   + YL+ + Q S  Y +A WR+   P+++ V++L A+ F F
Sbjct: 244 VLAQSVIQPQYLSMRDLRRNMDYLEGNGQSSGSYAVAFWRRALYPLNVLVLVLCAMPFAF 303

Query: 294 GPLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIA 348
           G LRS  +G R+  G++    +Y   +       VYG+PPL   L P+L+ +A A
Sbjct: 304 GSLRSGGLGKRMFIGILLALGWYFLQQAMVNFGTVYGMPPLVANLLPALILVAAA 358